Sounds like you have two products and should disclose the one that they apply for. If they change their mind and it causes the fees subject to the tolerance tests to increase, then that would be a changed circumstance. If they tell you that they want the product with no fees, disclosing the fees on the initial LE is not going to be in good faith.
As far as the recoupment of the fees for an early payoff:
(6) Prepayment penalty. (i) Closed-end credit transactions. For a closed-end credit transaction, prepayment penalty means a charge imposed for paying all or part of the transaction's principal before the date on which the principal is due, other than a waived, bona fide third-party charge that the creditor imposes if the consumer prepays all of the transaction's principal sooner than 36 months after consummation, provided, however, that interest charged consistent with the monthly interest accrual amortization method is not a prepayment penalty for extensions of credit insured by the Federal Housing Administration that are consummated before January 21, 2015.
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